Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. AP49 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
810255 bp
Thymine Count
809295 bp
Guanine Count
1440283 bp
Cytosine Count
1446355 bp
Genome Length
4506188 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate hub subunit and tail lysozyme | PMI04_RS00715 | Not Available | - | 147780 - 148454 | 23740.8 |
| phage late control d family protein | PMI04_RS00720 | Not Available | - | 148484 - 149575 | 39960.3 |
| duf5908 family protein | PMI04_RS00725 | Not Available | - | 149575 - 149766 | 6917.13 |
| hypothetical protein | PMI04_RS00730 | Not Available | - | 149766 - 151007 | 42471.6 |
| Tail protein | PMI04_RS00735 | Not Available | - | 151004 - 151486 | 17551.8 |
| Putative tail sheath protein | PMI04_RS00740 | Not Available | - | 151483 - 153438 | 69775.2 |
| Putative tail tube protein 2 | PMI04_RS00745 | Not Available | - | 153450 - 153905 | 16296.6 |
| Putative tail sheath protein | PMI04_RS00750 | Not Available | - | 153922 - 155784 | 65800.1 |
| Portal protein | PMI04_RS07795 | Not Available | + | 1617306 - 1618448 | 39565.5 |
| hypothetical protein | PMI04_RS07800 | Not Available | - | 1618556 - 1618693 | 5049.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
