Dehalobacter sp. CF

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfitobacteriaceae

Genus

Dehalobacter

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfitobacteriaceae
GenusDehalobacter
SpeciesDehalobacter sp. CF
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dehalobacter sp. CF

Accession NumberNC_018867.1

Gene Summary

Adenine Count

838448 bp

Thymine Count

883571 bp

Guanine Count

648078 bp

Cytosine Count

721951 bp

Genome Length

3092048 bp

Protein-coding Genes

2915 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hamp domain-containing sensor histidine kinaseDCF50_RS13690Q4L6C5-2863262 - 286468653856.4
response regulator transcription factorDCF50_RS13695Q2FH23-2864670 - 286535926451.2
duf4342 domain-containing proteinDCF50_RS13700Not Available-2865488 - 286605721380.1
marr family winged helix-turn-helix transcriptional regulatorDCF50_RS13705Not Available+2866362 - 286679316524.2
abc transporter atp-binding proteinDCF50_RS13710P9WQJ0+2866858 - 286858563268.2
abc transporter atp-binding proteinDCF50_RS13715P63398+2868582 - 287099688683.8
histidine kinaseDCF50_RS13720Not Available-2871003 - 287127810481.4
hdod domain-containing proteinDCF50_RS13725P26408-2871396 - 287258945523.0
sensor histidine kinaseDCF50_RS13730Q02482-2872582 - 287414759190.8
lyttr family transcriptional regulator dna-binding domain-containing proteinDCF50_RS13735P94514-2874170 - 287490127706.3

Displaying genes 2781 – 2790 of 2991 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 151 metabolites