Pseudothermotoga hypogea DSM 11164 = NBRC 106472

anaerobic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Thermotogaceae

Genus

Pseudothermotoga

Description

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyThermotogaceae
GenusPseudothermotoga
SpeciesPseudothermotoga hypogea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudothermotoga hypogea DSM 11164 = NBRC 106472

Accession NumberNZ_CP007141.1

Gene Summary

Adenine Count

544842 bp

Thymine Count

549276 bp

Guanine Count

528467 bp

Cytosine Count

542831 bp

Genome Length

2165416 bp

Protein-coding Genes

2105 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbAJ81_RS08370Q49V41+1704941 - 170564225764.3
threonine/serine dehydrataseAJ81_RS08375P36007+1705642 - 170661035376.8
ribonuclease h-like ykuk family proteinAJ81_RS08380Not Available-1706612 - 170701615361.4
alkaline phosphatase family proteinAJ81_RS08385Not Available-1707066 - 170825344785.3
rubredoxinAJ81_RS08390Q9AL94+1708373 - 17085376050.93
biotin transporter bioyAJ81_RS08395O26990-1708553 - 170910419952.2
5-(carboxyamino)imidazole ribonucleotide mutaseAJ81_RS08405Q9UY68+1709948 - 171040615893.5
phosphoribosylaminoimidazolesuccinocarboxamide synthaseAJ81_RS08410B5Y714+1710422 - 171112627286.0
phosphoribosylformylglycinamidine synthase subunit pursAJ81_RS08415Q58988+1711132 - 17113869452.69
phosphoribosylformylglycinamidine synthase iAJ81_RS08420A8F8I4+1711383 - 171208726352.4

Displaying genes 1691 – 1700 of 2157 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

120 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 120 metabolites