Kingdom
Thermotogati
Phylum
Thermotogota
Class
Thermotogae
Order
Thermotogales
Family
Thermotogaceae
Genus
Pseudothermotoga
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Thermotogota |
| Class | Thermotogae |
| Order | Thermotogales |
| Family | Thermotogaceae |
| Genus | Pseudothermotoga |
| Species | Pseudothermotoga hypogea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudothermotoga hypogea DSM 11164 = NBRC 106472
Accession NumberNZ_CP007141.1
Gene Summary
Adenine Count
544842 bp
Thymine Count
549276 bp
Guanine Count
528467 bp
Cytosine Count
542831 bp
Genome Length
2165416 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | AJ81_RS05695 | Q9X2B6 | - | 1145883 - 1146146 | 10303.5 |
| type i-b crispr-associated endonuclease cas1b | AJ81_RS05700 | B5YL10 | - | 1146220 - 1147203 | 38501.7 |
| crispr-associated protein cas4 | AJ81_RS05705 | Not Available | - | 1147213 - 1147713 | 19056.3 |
| crispr-associated endoribonuclease cas6 | AJ81_RS05710 | Q57820 | - | 1147710 - 1148492 | 30506.1 |
| sensor domain-containing diguanylate cyclase | AJ81_RS05715 | Not Available | + | 1148851 - 1149909 | 40036.5 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | AJ81_RS05720 | Not Available | - | 1149911 - 1150930 | 38040.7 |
| glycosyltransferase family 4 protein | AJ81_RS05725 | Q8KQL6 | - | 1150915 - 1151931 | 38520.6 |
| Trna-val | Not Available | Not Available | + | 1151987 - 1152061 | Not Available |
| atp-dependent dna helicase recg | AJ81_RS05735 | Q55681 | - | 1152064 - 1154433 | 89904.8 |
| hypoxanthine phosphoribosyltransferase | AJ81_RS05740 | P51900 | - | 1154536 - 1155054 | 20124.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
