Kingdom
Thermotogati
Phylum
Thermotogota
Class
Thermotogae
Order
Thermotogales
Family
Thermotogaceae
Genus
Pseudothermotoga
Description
Taxonomy
| Kingdom | Thermotogati |
|---|---|
| Phylum | Thermotogota |
| Class | Thermotogae |
| Order | Thermotogales |
| Family | Thermotogaceae |
| Genus | Pseudothermotoga |
| Species | Pseudothermotoga hypogea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudothermotoga hypogea DSM 11164 = NBRC 106472
Accession NumberNZ_CP007141.1
Gene Summary
Adenine Count
544842 bp
Thymine Count
549276 bp
Guanine Count
528467 bp
Cytosine Count
542831 bp
Genome Length
2165416 bp
Protein-coding Genes
2105 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-b crispr-associated endonuclease cas1b | AJ81_RS05350 | Not Available | - | 1069911 - 1070900 | 38690.9 |
| saved domain-containing protein | AJ81_RS05355 | Not Available | - | 1070941 - 1072344 | 53586.5 |
| hypothetical protein | AJ81_RS10795 | Not Available | + | 1074600 - 1074758 | 6103.44 |
| type iii-b crispr module ramp protein cmr6 | AJ81_RS05370 | Not Available | - | 1074884 - 1075645 | 29132.1 |
| type iii-b crispr module-associated protein cmr5 | AJ81_RS05375 | P58011 | - | 1075652 - 1075990 | 12868.8 |
| type iii-b crispr module ramp protein cmr4 | AJ81_RS05380 | Q8U1S9 | - | 1075971 - 1076840 | 32555.3 |
| type iii-b crispr module-associated protein cmr3 | AJ81_RS05385 | Q8U1S7 | - | 1076847 - 1077881 | 39385.5 |
| type iii-b crispr-associated protein cas10/cmr2 | AJ81_RS05390 | Q8U1S6 | - | 1077878 - 1080268 | 91319.1 |
| type iii-b crispr module ramp protein cmr1 | AJ81_RS05395 | Not Available | - | 1080265 - 1081650 | 53068.8 |
| tm1812 family crispr-associated protein | AJ81_RS05400 | Not Available | - | 1081707 - 1083107 | 54541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
