Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio xylanivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio xylanivorans DSM 14809
Accession NumberFQYQ00000000.1
Gene Summary
Adenine Count
1044767 bp
Thymine Count
1051393 bp
Guanine Count
655959 bp
Cytosine Count
668590 bp
Genome Length
3420924 bp
Protein-coding Genes
3078 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN02745725_00780 | Not Available | - | 910181 - 911065 | 33179.9 |
| shikimate dehydrogenase | SAMN02745725_00781 | Not Available | + | 911315 - 912190 | 31767.4 |
| major facilitator superfamily protein | SAMN02745725_00782 | Not Available | + | 912230 - 913447 | 42905.9 |
| 3-dehydroquinate dehydratase | SAMN02745725_00783 | Not Available | + | 913472 - 914233 | 27242.8 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN02745725_00784 | Not Available | + | 914308 - 914937 | 24702.8 |
| c4-dicarboxylate transporter, dctm subunit | SAMN02745725_00785 | Not Available | + | 914934 - 916223 | 45537.1 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN02745725_00786 | Not Available | + | 916233 - 917237 | 37632.7 |
| rna polymerase sporulation-specific sigma factor | SAMN02745725_00787 | Not Available | - | 917267 - 917854 | 22115.4 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN02745725_00788 | Not Available | - | 917873 - 918622 | 26886.3 |
| ribonuclease-3 family protein | SAMN02745725_00789 | Not Available | - | 918625 - 919065 | 16399.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.