Kingdom
Methanobacteriati
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Thermoplasmatales
Family
Picrophilaceae
Genus
Picrophilus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Thermoplasmatota |
| Class | Thermoplasmata |
| Order | Thermoplasmatales |
| Family | Picrophilaceae |
| Genus | Picrophilus |
| Species | Picrophilus oshimae |
| Strain | DSM 9789 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
494440 bp
Thymine Count
495390 bp
Guanine Count
275829 bp
Cytosine Count
280236 bp
Genome Length
1545895 bp
Protein-coding Genes
1585 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | PTO_RS00055 | Not Available | - | 10691 - 11632 | 34359.7 |
| n-acetylglucosamine-6-phosphate deacetylase | PTO_RS00060 | Not Available | + | 11719 - 12855 | 41543.1 |
| n-acetylmuramic acid 6-phosphate etherase | PTO_RS00065 | Not Available | + | 12889 - 13713 | 30313.1 |
| d-alanyl-d-alanine carboxypeptidase | PTO_RS00070 | Not Available | + | 13759 - 14730 | 36819.5 |
| diaminopimelate decarboxylase | PTO_RS00075 | Not Available | + | 14769 - 16028 | 45781.9 |
| c40 family peptidase | PTO_RS00080 | Not Available | - | 16006 - 16704 | 26514.6 |
| abc transporter substrate-binding protein | PTO_RS00085 | Not Available | + | 16975 - 20850 | 141470.0 |
| serine hydrolase domain-containing protein | PTO_RS00090 | Not Available | + | 20992 - 22047 | 39600.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | PTO_RS00095 | Not Available | + | 22078 - 23442 | 51300.5 |
| dipeptide epimerase | PTO_RS00100 | Not Available | - | 23451 - 24524 | 39520.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.