Kingdom
Methanobacteriati
Phylum
Thermoplasmatota
Class
Thermoplasmata
Order
Thermoplasmatales
Family
Picrophilaceae
Genus
Picrophilus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Thermoplasmatota |
| Class | Thermoplasmata |
| Order | Thermoplasmatales |
| Family | Picrophilaceae |
| Genus | Picrophilus |
| Species | Picrophilus oshimae |
| Strain | DSM 9789 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
494440 bp
Thymine Count
495390 bp
Guanine Count
275829 bp
Cytosine Count
280236 bp
Genome Length
1545895 bp
Protein-coding Genes
1585 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | PTO_RS08015 | Not Available | + | 49728 - 50006 | 10658.9 |
| hypothetical protein | PTO_RS00230 | Not Available | - | 50573 - 51046 | 18190.7 |
| crispr-associated endonuclease cas2 | PTO_RS00235 | Not Available | - | 52535 - 52795 | 10145.4 |
| type i-b crispr-associated endonuclease cas1b | PTO_RS00240 | Not Available | - | 52795 - 53757 | 37203.6 |
| type iii-a crispr-associated ramp protein csm5 | PTO_RS00245 | Not Available | - | 53790 - 54914 | 44131.1 |
| type iii-a crispr-associated ramp protein csm4 | PTO_RS00250 | Not Available | - | 54904 - 55815 | 35287.2 |
| type iii-a crispr-associated ramp protein csm3 | PTO_RS00255 | Not Available | - | 55796 - 56461 | 25413.1 |
| type iii-a crispr-associated protein csm2 | PTO_RS00260 | Not Available | - | 56466 - 56894 | 17107.5 |
| type iii-a crispr-associated protein cas10/csm1 | PTO_RS00265 | Not Available | - | 56884 - 59190 | 89360.4 |
| crispr-associated endoribonuclease cas6 | PTO_RS00270 | Not Available | - | 59180 - 59902 | 28363.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.