Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter glucosidilyticus |
| Strain | DD6b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264363 bp
Thymine Count
1263493 bp
Guanine Count
676298 bp
Cytosine Count
668224 bp
Genome Length
3872381 bp
Protein-coding Genes
3305 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Capsid component | PBAC_33150 | Not Available | + | 3823369 - 3824325 | 33156.2 |
| Capsid component | PBAC_33160 | Not Available | + | 3824870 - 3825748 | 32412.3 |
| Dna packaging protein | PBAC_33170 | Not Available | + | 3825751 - 3826188 | 15854.8 |
| Tail component | PBAC_33180 | Not Available | + | 3826565 - 3827143 | 21546.0 |
| Tail component | PBAC_33190 | Not Available | + | 3827140 - 3827535 | 14649.9 |
| Major tail protein v | PBAC_33200 | Not Available | + | 3827543 - 3828283 | 25811.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 62 - 172 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 331 - 3205 | Not Available |
| choline-sulfatase | PBAC_00010 | Not Available | - | 312 - 1874 | 59559.9 |
| 16s ribosomal rna | Not Available | Not Available | + | 3696 - 5205 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
