Hymenobacter daecheongensis DSM 21074

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter daecheongensis DSM 21074 is a Gram-negative, rod-shaped bacterium that demonstrates aerobic metabolism and is non-spore-forming. This microorganism has an optimal growth temperature of 16.0°C, indicating a preference for cooler environments, which may suggest its adaptation to specific ecological niches that are characterized by lower thermal conditions. Hymenobacter species are generally known for their ability to inhabit a variety of environments, often in association with moist surfaces, which could facilitate interactions with other microbial communities. The aerobic nature of H. daecheongensis implies a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its temperature preference and aerobic characteristics, H. daecheongensis may play a role in the biogeochemical cycling of nutrients in cold, oxygen-rich habitats, such as freshwater systems or high-altitude environments. Its ecological significance may extend to contributing to the microbial diversity and functionality within such habitats, potentially influencing the overall microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter daecheongensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter daecheongensis DSM 21074

Accession NumberFQYN00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3643 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domainsSAMN02745146_0325Not Available-4323874 - 432470728990.2
cytochrome c-type biogenesis protein ccmfSAMN02745146_0326Not Available-4324911 - 432750896585.2
cytochrome c-type biogenesis protein ccmeSAMN02745146_0327Not Available-4327641 - 432806615645.0
hypothetical proteinSAMN02745146_0328Not Available-4328228 - 432853310656.3
heme exporter protein cSAMN02745146_0329Not Available-4328514 - 432918525072.0
heme exporter protein bSAMN02745146_0330Not Available-4329182 - 432985324448.9
por secretion system c-terminal sorting domain-containing proteinSAMN02745146_0331Not Available-4330216 - 433173653174.2
component of the tol biopolymer transport systemSAMN02745146_0332Not Available-4331892 - 4335131122117.0
glycine/d-amino acid oxidaseSAMN02745146_0333Not Available-4335156 - 433625039494.5
glyoxylase, beta-lactamase superfamily iiSAMN02745146_0334Not Available+4336385 - 433709225812.8

Displaying genes 3661 – 3670 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites