Hymenobacter daecheongensis DSM 21074

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter daecheongensis DSM 21074 is a Gram-negative, rod-shaped bacterium that demonstrates aerobic metabolism and is non-spore-forming. This microorganism has an optimal growth temperature of 16.0°C, indicating a preference for cooler environments, which may suggest its adaptation to specific ecological niches that are characterized by lower thermal conditions. Hymenobacter species are generally known for their ability to inhabit a variety of environments, often in association with moist surfaces, which could facilitate interactions with other microbial communities. The aerobic nature of H. daecheongensis implies a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its temperature preference and aerobic characteristics, H. daecheongensis may play a role in the biogeochemical cycling of nutrients in cold, oxygen-rich habitats, such as freshwater systems or high-altitude environments. Its ecological significance may extend to contributing to the microbial diversity and functionality within such habitats, potentially influencing the overall microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter daecheongensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter daecheongensis DSM 21074

Accession NumberFQYN00000000.1

Gene Summary

Adenine Count

847863 bp

Thymine Count

853555 bp

Guanine Count

1339294 bp

Cytosine Count

1345034 bp

Genome Length

4385746 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rhomboid protease glupSAMN02745146_0005Not Available-3976399 - 397725029719.7
hypothetical proteinSAMN02745146_0006Not Available+3977404 - 39776678681.56
beta-lactamase enzyme family proteinSAMN02745146_0007Not Available+3977880 - 397915748507.3
d-alanyl-d-alanine dipeptidaseSAMN02745146_0008Not Available+3979147 - 397977623712.0
uncharacterized lipoprotein yddw, upf0748 familySAMN02745146_0009Not Available+3979879 - 398176271921.6
hypothetical proteinSAMN02745146_0010Not Available-3981848 - 398310744595.1
starch-binding associating with outer membraneSAMN02745146_0011Not Available-3983148 - 398469856272.5
tonb-linked outer membrane protein, susc/raga familySAMN02745146_0012Not Available-3984787 - 3987930112525.0
glucosamine-6-phosphate deaminaseSAMN02745146_0013Not Available+3988275 - 399018871685.9
anhydro-n-acetylmuramic acid kinaseSAMN02745146_0014Not Available+3990526 - 399173742586.9

Displaying genes 3381 – 3390 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites