Hymenobacter daecheongensis DSM 21074

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter daecheongensis DSM 21074 is a Gram-negative, rod-shaped bacterium that demonstrates aerobic metabolism and is non-spore-forming. This microorganism has an optimal growth temperature of 16.0°C, indicating a preference for cooler environments, which may suggest its adaptation to specific ecological niches that are characterized by lower thermal conditions. Hymenobacter species are generally known for their ability to inhabit a variety of environments, often in association with moist surfaces, which could facilitate interactions with other microbial communities. The aerobic nature of H. daecheongensis implies a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its temperature preference and aerobic characteristics, H. daecheongensis may play a role in the biogeochemical cycling of nutrients in cold, oxygen-rich habitats, such as freshwater systems or high-altitude environments. Its ecological significance may extend to contributing to the microbial diversity and functionality within such habitats, potentially influencing the overall microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter daecheongensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter daecheongensis DSM 21074

Accession NumberFQYN00000000.1

Gene Summary

Adenine Count

847863 bp

Thymine Count

853555 bp

Guanine Count

1339294 bp

Cytosine Count

1345034 bp

Genome Length

4385746 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
por secretion system c-terminal sorting domain-containing proteinSAMN02745146_3707Not Available-3855774 - 385841693147.8
por secretion system c-terminal sorting domain-containing proteinSAMN02745146_3708Not Available+3858750 - 386122187358.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN02745146_3709Not Available-3861308 - 386275953324.5
hydrophobic/amphiphilic exporter-1, hae1 familySAMN02745146_3710Not Available-3862752 - 3865943116091.0
membrane fusion protein, multidrug efflux systemSAMN02745146_3711Not Available-3866074 - 386715940545.8
spou rrna methylase family proteinSAMN02745146_3712Not Available-3867400 - 386792418886.7
dna mismatch repair protein mutsSAMN02745146_3713Not Available+3868193 - 3870901100190.0
Trna-glyNot AvailableNot Available+3871097 - 3871169Not Available
hnh endonucleaseSAMN02745146_3715Not Available+3871304 - 387178317884.6
Trna-leuNot AvailableNot Available+3871769 - 3871852Not Available

Displaying genes 3301 – 3310 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites