Hymenobacter daecheongensis DSM 21074

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter daecheongensis DSM 21074 is a Gram-negative, rod-shaped bacterium that demonstrates aerobic metabolism and is non-spore-forming. This microorganism has an optimal growth temperature of 16.0°C, indicating a preference for cooler environments, which may suggest its adaptation to specific ecological niches that are characterized by lower thermal conditions. Hymenobacter species are generally known for their ability to inhabit a variety of environments, often in association with moist surfaces, which could facilitate interactions with other microbial communities. The aerobic nature of H. daecheongensis implies a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its temperature preference and aerobic characteristics, H. daecheongensis may play a role in the biogeochemical cycling of nutrients in cold, oxygen-rich habitats, such as freshwater systems or high-altitude environments. Its ecological significance may extend to contributing to the microbial diversity and functionality within such habitats, potentially influencing the overall microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter daecheongensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter daecheongensis DSM 21074

Accession NumberFQYN00000000.1

Gene Summary

Adenine Count

847863 bp

Thymine Count

853555 bp

Guanine Count

1339294 bp

Cytosine Count

1345034 bp

Genome Length

4385746 bp

Protein-coding Genes

3643 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
recombination protein recaSAMN02745146_1353Not Available+1150239 - 115133339013.1
protein of unknown functionSAMN02745146_1354Not Available+1151545 - 115236931795.2
two-component system, ompr family, alkaline phosphatase synthesis response regulator phopSAMN02745146_1355Not Available+1152605 - 115330326096.4
two-component system, ompr family, phosphate regulon sensor histidine kinase phorSAMN02745146_1356Not Available+1153441 - 115452040042.8
23s rrna pseudouridine955/2504/2580 synthaseSAMN02745146_1357Not Available+1154556 - 115526927392.9
4-amino-4-deoxy-l-arabinose transferaseSAMN02745146_1358Not Available-1155279 - 115676055007.4
lsu ribosomal protein l13pSAMN02745146_1359Not Available+1156961 - 115741316623.9
ssu ribosomal protein s9pSAMN02745146_1360Not Available+1157456 - 115784214483.6
ssu ribosomal protein s2pSAMN02745146_1361Not Available+1157861 - 115862828583.8
translation elongation factor ts (ef-ts)SAMN02745146_1362Not Available+1158787 - 115962329886.8

Displaying genes 991 – 1000 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites