Devosia limi DSM 17137

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Devosia

Description

Devosia limi DSM 17137 is a Gram-negative, rod-shaped bacterium that requires aerobic conditions for growth and has an optimal temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, indicating that it does not produce spores as a means of survival under adverse conditions. The Gram-negative classification suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of many environmental bacteria. The growth conditions preferred by Devosia limi suggest a possible adaptation to specific ecological niches, potentially including freshwater or soil environments where such temperature and oxygen conditions are prevalent. The aerobic requirement emphasizes its reliance on oxygen for metabolic processes, further indicating its role in nutrient cycling within its habitat. Understanding the physiological traits of Devosia limi DSM 17137 enhances our insight into its potential interactions within microbial communities. Its non-spore-forming characteristic may influence its competitive dynamics with other microorganisms that can enter a dormant state under unfavorable conditions. This trait, in combination with its aerobic metabolism, may position Devosia limi as a significant player in the degradation of organic matter in oxygen-rich environments, contributing to the overall health and balance of its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusDevosia
SpeciesDevosia limi
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Devosia limi DSM 17137

Accession NumberFQVC00000000.1

Gene Summary

Adenine Count

798843 bp

Thymine Count

803222 bp

Guanine Count

1343591 bp

Cytosine Count

1351571 bp

Genome Length

4297655 bp

Protein-coding Genes

4048 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745223_00708Not Available+768634 - 76988745525.8
Trna-leuNot AvailableNot Available+770018 - 770103Not Available
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN02745223_00710Not Available+770120 - 77050013315.2
hypothetical proteinSAMN02745223_00711Not Available+770500 - 77078710573.8
trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthaseSAMN02745223_00712Not Available-770833 - 77150424951.0
uncharacterized conserved protein yjbj, upf0337 familySAMN02745223_00713Not Available+771632 - 7718146364.62
dihydrofolate reductaseSAMN02745223_00714Not Available-771863 - 77239019804.8
transcriptional regulator, tetr familySAMN02745223_00715Not Available+772456 - 77303120560.8
methylated-dna-[protein]-cysteine s-methyltransferaseSAMN02745223_00716Not Available+773057 - 77361118771.8
chad domain-containing proteinSAMN02745223_00717Not Available+773608 - 77451633826.6

Displaying genes 751 – 760 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites