Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Halodesulfovibrio marinisediminis DSM 17456
Accession NumberFSRG00000000.1
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycogen recognition site of amp-activated protein kinase | SAMN02745161_0794 | Not Available | - | 825467 - 826090 | 23531.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745161_0795 | Not Available | - | 826087 - 826644 | 20932.0 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN02745161_0796 | Not Available | + | 826929 - 828971 | 74414.6 |
| l-tartrate/succinate antiporter | SAMN02745161_0797 | Not Available | + | 829244 - 830650 | 50575.3 |
| signal transduction histidine kinase | SAMN02745161_0798 | Not Available | + | 830923 - 834330 | 128692.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745161_0799 | Not Available | + | 834323 - 835222 | 33715.0 |
| phenazine biosynthesis protein phzf family | SAMN02745161_0800 | Not Available | + | 835272 - 836057 | 28812.6 |
| multidrug efflux pump subunit acrb | SAMN02745161_0801 | Not Available | - | 836189 - 839266 | 114526.0 |
| rnd family efflux transporter, mfp subunit | SAMN02745161_0802 | Not Available | - | 839279 - 840367 | 40309.0 |
| transporter, cpa2 family | SAMN02745161_0803 | Not Available | + | 840611 - 842266 | 60275.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
