Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | M5M_RS04155 | Not Available | + | 907050 - 907331 | 10855.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | M5M_RS04160 | B3PKB3 | - | 907338 - 908396 | 39748.1 |
| alpha/beta family hydrolase | M5M_RS04165 | Not Available | - | 908390 - 909028 | 23523.2 |
| yheu family protein | M5M_RS04170 | A8GKN0 | - | 909093 - 909326 | 8774.42 |
| class i sam-dependent methyltransferase | M5M_RS04175 | Not Available | - | 909330 - 910136 | 28973.5 |
| glycine cleavage system protein r | M5M_RS04180 | Not Available | + | 910265 - 910804 | 19365.1 |
| lamg domain-containing protein | M5M_RS04185 | Not Available | - | 910828 - 914481 | 128880.0 |
| msha biogenesis protein mshp | M5M_RS04190 | Not Available | - | 914478 - 914825 | 11869.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | M5M_RS04195 | Not Available | - | 914899 - 915684 | 27528.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | M5M_RS04200 | Not Available | - | 915684 - 916151 | 16165.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.