Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine transaminase | M5M_RS03505 | P52878 | - | 774494 - 775609 | 40781.7 |
| d-hexose-6-phosphate mutarotase | M5M_RS03510 | Q8ZPV9 | - | 775681 - 776544 | 31660.4 |
| thioredoxin | M5M_RS03515 | P77395 | - | 776548 - 777423 | 31432.6 |
| dyp-type peroxidase | M5M_RS03520 | Q743F4 | - | 777427 - 778275 | 31232.1 |
| duf3014 domain-containing protein | M5M_RS03525 | Not Available | - | 778284 - 779078 | 29146.5 |
| phosphoribosylformylglycinamidine synthase | M5M_RS03530 | Q88P16 | - | 779146 - 783021 | 139526.0 |
| membrane-bound lytic murein transglycosylase mltf | M5M_RS03535 | Q21KP0 | + | 783439 - 784899 | 54249.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | M5M_RS03540 | Q9A3Q9 | + | 785061 - 786368 | 46923.5 |
| sodium:alanine symporter family protein | M5M_RS03545 | P44917 | - | 786420 - 787706 | 44720.6 |
| d-cysteine desulfhydrase family protein | M5M_RS03550 | A3SQG3 | - | 787754 - 788818 | 37921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.