Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 4 | M5M_RS03315 | C5BRN3 | - | 737493 - 739292 | 66094.1 |
| degq family serine endoprotease | M5M_RS03320 | F6AA62 | - | 739424 - 740809 | 49724.6 |
| soxr reducing system rsec family protein | M5M_RS19295 | Not Available | - | 740840 - 741301 | 15957.0 |
| mucb/rseb c-terminal domain-containing protein | M5M_RS03330 | P44792 | - | 741301 - 742173 | 31868.2 |
| sigma-e factor negative regulatory protein | M5M_RS03335 | P38107 | - | 742237 - 742923 | 24257.6 |
| rna polymerase sigma factor rpoe | M5M_RS03340 | D0ZSY9 | - | 743048 - 743641 | 22332.4 |
| l-aspartate oxidase | M5M_RS03345 | Q51363 | + | 743831 - 745462 | 60091.1 |
| hypothetical protein | M5M_RS20065 | Not Available | - | 745441 - 745827 | 15030.6 |
| succinate dehydrogenase assembly factor 2 | M5M_RS03350 | Q88MZ4 | - | 745865 - 746110 | 9918.91 |
| folate-binding protein ygfz | M5M_RS03355 | Q5E304 | + | 746241 - 747191 | 34836.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.