Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter transmembrane domain-containing protein | M5M_RS18775 | P50598 | + | 4204145 - 4204828 | 24839.9 |
| protein tolr | M5M_RS18780 | P50599 | + | 4204882 - 4205277 | 14175.5 |
| cell envelope integrity protein tola | M5M_RS18785 | Not Available | + | 4205281 - 4206039 | 28558.1 |
| tol-pal system beta propeller repeat protein tolb | M5M_RS18790 | Q21HP0 | + | 4206051 - 4207322 | 46465.4 |
| peptidoglycan-associated lipoprotein pal | M5M_RS18795 | Q9I4Z4 | + | 4207349 - 4207831 | 17735.9 |
| tol-pal system protein ybgf | M5M_RS18800 | Not Available | + | 4207937 - 4208653 | 26237.1 |
| 7-carboxy-7-deazaguanine synthase quee | M5M_RS18805 | Q1IHK7 | + | 4208717 - 4209367 | 24317.1 |
| abc transporter substrate-binding protein | M5M_RS18810 | Not Available | + | 4209351 - 4210211 | 31550.2 |
| 7-cyano-7-deazaguanine synthase quec | M5M_RS18815 | C3JYR8 | + | 4210204 - 4210878 | 23941.5 |
| Trna-lys | Not Available | Not Available | + | 4210960 - 4211035 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.