Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | M5M_RS18580 | P0DPE4 | + | 4160792 - 4162033 | 45080.6 |
| dead/deah box helicase | M5M_RS18585 | P25888 | + | 4162128 - 4163432 | 47899.5 |
| hypothetical protein | M5M_RS18590 | Not Available | - | 4163513 - 4164055 | 20638.0 |
| duf3820 family protein | M5M_RS18595 | P0AD41 | - | 4164159 - 4164407 | 9202.34 |
| stress response translation initiation inhibitor ycih | M5M_RS18600 | P08245 | - | 4164407 - 4164730 | 11204.5 |
| hypothetical protein | M5M_RS18605 | Not Available | - | 4164723 - 4165064 | 12694.6 |
| ion transporter | M5M_RS18610 | Q02006 | + | 4165115 - 4165993 | 32741.1 |
| lyse family translocator | M5M_RS18615 | A4WB82 | - | 4165964 - 4166542 | 20083.3 |
| serine hydrolase domain-containing protein | M5M_RS18620 | P71778 | + | 4166681 - 4167841 | 41342.3 |
| slyx family protein | M5M_RS18625 | Not Available | + | 4167844 - 4168068 | 8947.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.