Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-guanine dinucleotide biosynthesis protein b | M5M_RS17785 | P32125 | - | 3981435 - 3981962 | 19298.8 |
| cytochrome c3 family protein | M5M_RS19760 | Not Available | - | 3981999 - 3983408 | 51418.3 |
| hypothetical protein | M5M_RS17795 | Not Available | - | 3983465 - 3984307 | 31015.9 |
| nad(p)-binding domain-containing protein | M5M_RS17800 | A8AA47 | - | 3984304 - 3986559 | 81812.5 |
| hypothetical protein | M5M_RS20420 | Not Available | + | 3986710 - 3986850 | 5020.25 |
| dna polymerase iii subunit gamma/tau | M5M_RS17805 | P74876 | + | 3986985 - 3989036 | 72811.5 |
| ybab/ebfc family nucleoid-associated protein | M5M_RS17810 | Q9I3I0 | + | 3989050 - 3989373 | 11871.5 |
| recombination mediator recr | M5M_RS17815 | Q21L30 | + | 3989417 - 3990010 | 21006.3 |
| ribonuclease d | M5M_RS17820 | A6V8R6 | + | 3990010 - 3991161 | 42808.8 |
| ycgl domain-containing protein | M5M_RS17825 | Q1I6K3 | + | 3991170 - 3991454 | 10834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.