Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | M5M_RS17735 | P58112 | - | 3974075 - 3974875 | 29109.8 |
| fmn-dependent nadh-azoreductase | M5M_RS17740 | Q0VTN3 | - | 3974885 - 3975451 | 20374.2 |
| lysr substrate-binding domain-containing protein | M5M_RS17745 | P76369 | + | 3975565 - 3976467 | 32883.8 |
| putative porin | M5M_RS17750 | Not Available | + | 3976623 - 3977342 | 25779.5 |
| alkane 1-monooxygenase | M5M_RS17755 | Q0VKZ3 | + | 3977466 - 3978659 | 45961.3 |
| duf4124 domain-containing protein | M5M_RS19755 | Not Available | + | 3978672 - 3979154 | 17404.8 |
| group ii truncated hemoglobin | M5M_RS17765 | Not Available | + | 3979286 - 3979708 | 16152.4 |
| mosc domain-containing protein | M5M_RS17770 | Q9CW42 | - | 3979736 - 3980602 | 32038.4 |
| duf1244 domain-containing protein | M5M_RS17775 | Not Available | - | 3980616 - 3980930 | 11903.0 |
| molybdenum cofactor biosynthesis protein b | M5M_RS17780 | P0AF00 | - | 3980933 - 3981451 | 18450.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.