Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilin | M5M_RS17580 | Q07564 | + | 3943458 - 3943898 | 14855.6 |
| hypothetical protein | M5M_RS17585 | Not Available | + | 3943993 - 3944706 | 26879.0 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS17590 | Not Available | - | 3944869 - 3945609 | 26938.0 |
| fad-binding oxidoreductase | M5M_RS17595 | P9WJF0 | - | 3945606 - 3946922 | 48649.5 |
| gtra family protein | M5M_RS17600 | Not Available | - | 3946919 - 3947314 | 15032.8 |
| decaprenyl-phosphate phosphoribosyltransferase | M5M_RS17605 | A0R626 | + | 3947354 - 3948217 | 31719.6 |
| divergent pap2 family protein | M5M_RS17610 | Not Available | + | 3948205 - 3948627 | 15097.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | M5M_RS17615 | P30819 | - | 3948620 - 3949480 | 30917.9 |
| tigr02281 family clan aa aspartic protease | M5M_RS17620 | Not Available | - | 3949576 - 3950106 | 19171.2 |
| duf1631 domain-containing protein | M5M_RS17625 | Not Available | + | 3950312 - 3952588 | 83575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.