Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-acyl-n-acetylglucosamine deacetylase | M5M_RS17530 | Q21MG3 | + | 3931188 - 3932099 | 33351.1 |
| m23 family metallopeptidase | M5M_RS17535 | P0AFT0 | + | 3932364 - 3933296 | 33638.1 |
| preprotein translocase subunit seca | M5M_RS17540 | B3PCL0 | + | 3933405 - 3936104 | 101784.0 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | M5M_RS17545 | Q9HW04 | + | 3936219 - 3937439 | 42540.6 |
| nudix family hydrolase | M5M_RS17550 | P08337 | + | 3937439 - 3938392 | 33758.5 |
| dna gyrase inhibitor yacg | M5M_RS17555 | Q1I4U6 | - | 3938414 - 3938614 | 7593.11 |
| dephospho-coa kinase | M5M_RS17560 | Q5R0N3 | - | 3938662 - 3939255 | 21202.4 |
| a24 family peptidase | M5M_RS17565 | P22610 | - | 3939252 - 3940076 | 30067.2 |
| type ii secretion system f family protein | M5M_RS17570 | P22609 | - | 3940149 - 3941384 | 44501.2 |
| type iv-a pilus assembly atpase pilb | M5M_RS17575 | P22608 | - | 3941391 - 3943121 | 62796.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.