Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | M5M_RS17480 | P11880 | + | 3919053 - 3920441 | 48269.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | M5M_RS17485 | B3PCM3 | + | 3920441 - 3921523 | 39138.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | M5M_RS17490 | Q9HVZ9 | + | 3921543 - 3922892 | 47447.4 |
| putative lipid ii flippase ftsw | M5M_RS17495 | B3PCM1 | + | 3922889 - 3924151 | 45756.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | M5M_RS17500 | Q8XVI7 | + | 3924144 - 3925205 | 37779.9 |
| udp-n-acetylmuramate--l-alanine ligase | M5M_RS17505 | Q21MG8 | + | 3925198 - 3926619 | 51166.2 |
| d-alanine--d-alanine ligase | M5M_RS17510 | Q21MG7 | + | 3926624 - 3927574 | 33755.6 |
| cell division protein ftsq/divib | M5M_RS17515 | G3XDA7 | + | 3927571 - 3928326 | 28634.7 |
| cell division protein ftsa | M5M_RS17520 | P47203 | + | 3928387 - 3929619 | 43984.8 |
| cell division protein ftsz | M5M_RS17525 | P47204 | + | 3929691 - 3930857 | 40382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.