Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | M5M_RS17430 | Q1GYY7 | - | 3906618 - 3906956 | 12671.0 |
| penicillin-binding protein activator | M5M_RS17435 | D0KEP3 | - | 3906956 - 3908821 | 69094.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | M5M_RS17440 | Q9HVZ3 | + | 3908863 - 3909699 | 30088.3 |
| tigr00730 family rossman fold protein | M5M_RS17445 | Not Available | + | 3909739 - 3910614 | 32548.1 |
| tonb-dependent receptor | M5M_RS17450 | Not Available | - | 3910673 - 3913048 | 86494.4 |
| division/cell wall cluster transcriptional repressor mraz | M5M_RS17455 | B3PCM9 | + | 3914128 - 3914571 | 16540.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | M5M_RS17460 | C5BP42 | + | 3914581 - 3915501 | 33409.1 |
| cell division protein ftsl | M5M_RS17465 | Not Available | + | 3915576 - 3915866 | 10674.1 |
| penicillin-binding protein 2 | M5M_RS17470 | G3XD46 | + | 3915863 - 3917572 | 61891.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | M5M_RS17475 | Q7N142 | + | 3917572 - 3919056 | 52887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.