Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4124 domain-containing protein | M5M_RS17380 | Not Available | + | 3895322 - 3895780 | 16354.2 |
| atp-dependent chaperone clpb | M5M_RS17385 | Q9HVN5 | - | 3895839 - 3898415 | 95157.7 |
| peptidoglycan editing factor pgef | M5M_RS17390 | P33663 | - | 3898537 - 3899295 | 26788.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | M5M_RS17395 | P33640 | - | 3899288 - 3900256 | 35090.4 |
| outer membrane protein assembly factor bamd | M5M_RS17400 | P33641 | + | 3900377 - 3901297 | 34986.1 |
| m48 family metallopeptidase | M5M_RS17405 | B5YDL5 | - | 3901345 - 3903228 | 67485.2 |
| lema family protein | M5M_RS17410 | A8AVK0 | - | 3903228 - 3903824 | 21737.1 |
| acetyl-coa c-acyltransferase | M5M_RS17415 | Q8S4Y1 | + | 3904152 - 3905330 | 40355.8 |
| bon domain-containing protein | M5M_RS17420 | P45301 | - | 3905429 - 3906001 | 20562.1 |
| sis domain-containing protein | M5M_RS17425 | Q1QVF5 | - | 3906001 - 3906588 | 20615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.