Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | M5M_RS17330 | O31214 | + | 3884864 - 3885457 | 20938.0 |
| ubiquinol-cytochrome c reductase | M5M_RS17335 | O31215 | + | 3885460 - 3887682 | 82802.6 |
| glutathione s-transferase n-terminal domain-containing protein | M5M_RS17340 | P0ACA5 | + | 3887767 - 3888408 | 24825.8 |
| clpxp protease specificity-enhancing factor | M5M_RS17345 | P0AFZ4 | + | 3888439 - 3888864 | 15336.7 |
| s1 rna-binding domain-containing protein | M5M_RS17350 | O06747 | + | 3888931 - 3889758 | 30515.7 |
| cysteine synthase a | M5M_RS17355 | P0A1E4 | - | 3889763 - 3890731 | 34202.1 |
| yip1 family protein | M5M_RS17360 | P0AD18 | + | 3890935 - 3891552 | 22568.9 |
| ketol-acid reductoisomerase | M5M_RS17365 | B8GUB6 | - | 3891616 - 3892641 | 36823.0 |
| acetolactate synthase small subunit | M5M_RS17370 | P21622 | - | 3892689 - 3893180 | 17763.8 |
| acetolactate synthase 3 large subunit | M5M_RS17375 | P00893 | - | 3893180 - 3894907 | 63435.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.