Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fada | M5M_RS01705 | Q21KB1 | + | 368844 - 370022 | 41304.1 |
| hypothetical protein | M5M_RS01710 | Not Available | + | 370023 - 371444 | 52078.5 |
| trab/gumn family protein | M5M_RS01715 | Not Available | + | 371471 - 372367 | 32477.0 |
| Trna-leu | Not Available | Not Available | + | 372488 - 372572 | Not Available |
| trigger factor | M5M_RS01725 | B3PHK7 | + | 372628 - 373947 | 48932.2 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | M5M_RS01730 | Q21KA9 | + | 374141 - 374767 | 22811.6 |
| atp-dependent clp protease atp-binding subunit clpx | M5M_RS01735 | B3PHK5 | + | 374857 - 376155 | 47374.8 |
| endopeptidase la | M5M_RS01740 | P74956 | + | 376336 - 378744 | 88932.8 |
| nucleoid-associated protein hu-beta | M5M_RS01745 | P05384 | + | 379007 - 379282 | 9250.19 |
| sura n-terminal domain-containing protein | M5M_RS01750 | P44092 | + | 379422 - 381299 | 67862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.