Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bola family protein | M5M_RS17280 | Not Available | + | 3876572 - 3876802 | 8157.69 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | M5M_RS17285 | Q21FV2 | + | 3876831 - 3878096 | 44899.1 |
| atp phosphoribosyltransferase | M5M_RS17290 | Q21FV3 | + | 3878093 - 3878719 | 22512.7 |
| histidinol dehydrogenase | M5M_RS17295 | Q3KHZ2 | + | 3878719 - 3880017 | 46084.1 |
| trypsin-like peptidase domain-containing protein | M5M_RS17300 | P0AEE4 | - | 3880023 - 3881153 | 39917.3 |
| yhcb family protein | M5M_RS17305 | Not Available | - | 3881247 - 3881723 | 17871.0 |
| alpha/beta hydrolase | M5M_RS17310 | Not Available | + | 3881917 - 3882585 | 23782.2 |
| cell division protein zape | M5M_RS17315 | P64613 | + | 3882582 - 3883685 | 41812.1 |
| 50s ribosomal protein l13 | M5M_RS17320 | Q21FV8 | + | 3883794 - 3884222 | 15850.2 |
| 30s ribosomal protein s9 | M5M_RS17325 | Q21FV9 | + | 3884234 - 3884626 | 14654.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.