Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | M5M_RS17180 | P0A9X5 | + | 3858380 - 3859414 | 36925.6 |
| rod shape-determining protein mrec | M5M_RS17185 | P16926 | + | 3859482 - 3860321 | 30379.9 |
| rod shape-determining protein mred | M5M_RS17190 | P0ABH6 | + | 3860299 - 3860784 | 18137.7 |
| nucleoside triphosphate pyrophosphatase | M5M_RS17195 | Q21FT3 | + | 3860848 - 3861429 | 20867.0 |
| ribonuclease g | M5M_RS17200 | A0A0H3NGK0 | + | 3861426 - 3862904 | 55611.1 |
| yhdp family protein | M5M_RS17205 | Not Available | + | 3862910 - 3866935 | 146447.0 |
| peptide-methionine (r)-s-oxide reductase msrb | M5M_RS17210 | Q8DJK9 | + | 3867006 - 3867542 | 19892.8 |
| trimeric intracellular cation channel family protein | M5M_RS17215 | Q9R9S0 | - | 3867493 - 3868131 | 22746.3 |
| ribosome biogenesis factor yjga | M5M_RS17220 | A6VBI8 | - | 3868131 - 3868640 | 19567.4 |
| hpr family phosphocarrier protein | M5M_RS17225 | Q9HVV2 | - | 3868697 - 3868963 | 9387.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.