Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS17130 | Not Available | + | 3847240 - 3848058 | 29297.9 |
| hdod domain-containing protein | M5M_RS17135 | Not Available | - | 3848047 - 3848868 | 29834.6 |
| diguanylate cyclase | M5M_RS19750 | Not Available | + | 3848976 - 3850640 | 61735.7 |
| atp-dependent rna helicase rhlb | M5M_RS17145 | B7UUT0 | + | 3850998 - 3852287 | 47523.8 |
| diguanylate cyclase | M5M_RS17150 | Q83KM9 | + | 3852405 - 3853673 | 46821.8 |
| sulfate transporter cysz | M5M_RS17155 | B5R3V6 | - | 3853670 - 3854443 | 28626.1 |
| pa4642 family protein | M5M_RS17160 | Not Available | - | 3854479 - 3854775 | 10818.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | M5M_RS17165 | B3PC09 | - | 3854869 - 3856320 | 53262.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | M5M_RS17170 | Q21FS8 | - | 3856348 - 3857802 | 51660.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | M5M_RS17175 | Q1IED2 | - | 3857823 - 3858110 | 10501.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.