Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | M5M_RS17080 | Not Available | + | 3830319 - 3830975 | 25092.2 |
| m2 family metallopeptidase | M5M_RS17085 | Q10751 | + | 3830997 - 3832841 | 68708.4 |
| peptide mfs transporter | M5M_RS17090 | P94408 | - | 3832894 - 3834663 | 63492.6 |
| tetratricopeptide repeat protein | M5M_RS17095 | Not Available | + | 3834810 - 3835973 | 43865.3 |
| 2og-fe(ii) oxygenase family protein | M5M_RS19740 | Not Available | + | 3835924 - 3836634 | 27024.8 |
| putative 2og-fe(ii) oxygenase | M5M_RS19745 | Not Available | + | 3836636 - 3838408 | 66037.5 |
| tonb-dependent receptor domain-containing protein | M5M_RS17110 | A4WG45 | - | 3838865 - 3841861 | 106313.0 |
| tonb-dependent siderophore receptor | M5M_RS17115 | Q93SE0 | - | 3842003 - 3844975 | 107158.0 |
| fecr family protein | M5M_RS17120 | Not Available | - | 3845085 - 3846086 | 36511.7 |
| rna polymerase sigma factor | M5M_RS17125 | P23484 | - | 3846482 - 3847027 | 20379.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.