Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS16980 | Not Available | + | 3809234 - 3809611 | 13982.8 |
| hypothetical protein | M5M_RS16985 | Not Available | + | 3809700 - 3810116 | 15361.7 |
| apolipoprotein n-acyltransferase | M5M_RS16990 | A6V0C5 | - | 3810155 - 3811633 | 54726.7 |
| hlyc/corc family transporter | M5M_RS16995 | P0AE80 | - | 3811630 - 3812478 | 31967.6 |
| rrna maturation rnase ybey | M5M_RS17000 | Q21FH2 | - | 3812535 - 3813035 | 18225.4 |
| phoh family protein | M5M_RS17005 | P0A9K5 | - | 3812995 - 3814020 | 37118.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | M5M_RS17010 | B3PER6 | - | 3814124 - 3815494 | 50427.2 |
| duf1820 family protein | M5M_RS17015 | Not Available | + | 3815656 - 3815997 | 12867.5 |
| lyse family translocator | M5M_RS17020 | Not Available | + | 3816072 - 3816725 | 23286.3 |
| mechanosensitive ion channel domain-containing protein | M5M_RS17025 | Not Available | + | 3816736 - 3817470 | 26811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.