Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | M5M_RS16830 | O68562 | - | 3774644 - 3775048 | 15594.8 |
| ferric iron uptake transcriptional regulator | M5M_RS16835 | Q03456 | + | 3775132 - 3775539 | 15416.3 |
| dna repair protein recn | M5M_RS16840 | P05824 | - | 3775699 - 3777357 | 60581.0 |
| nucleotide exchange factor grpe | M5M_RS16845 | Q21H35 | + | 3777553 - 3778116 | 20538.3 |
| molecular chaperone dnak | M5M_RS16850 | C5BQ33 | + | 3778242 - 3780173 | 68663.2 |
| molecular chaperone dnaj | M5M_RS16855 | Q21H37 | + | 3780282 - 3781409 | 40408.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | M5M_RS16860 | C5BQ31 | + | 3781453 - 3782259 | 28078.6 |
| yfir family protein | M5M_RS16865 | Not Available | + | 3782428 - 3783000 | 20328.9 |
| methyl-accepting chemotaxis protein | M5M_RS16870 | Q88NI1 | + | 3783045 - 3784595 | 53876.9 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | M5M_RS16875 | C5BQ30 | + | 3784931 - 3786067 | 40607.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.