Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | M5M_RS16730 | Not Available | - | 3756682 - 3757131 | 16054.1 |
| choice-of-anchor b family protein | M5M_RS16735 | Not Available | + | 3757252 - 3758595 | 48687.3 |
| glutathione s-transferase family protein | M5M_RS16740 | P46436 | + | 3758628 - 3759248 | 22701.2 |
| abc transporter substrate-binding protein | M5M_RS16745 | Not Available | - | 3759250 - 3760137 | 31914.4 |
| 2og-fe(ii) oxygenase | M5M_RS16750 | Not Available | + | 3760234 - 3760932 | 25618.5 |
| alkyl hydroperoxide reductase subunit f | M5M_RS16755 | P26829 | - | 3761019 - 3762626 | 57128.5 |
| alkyl hydroperoxide reductase subunit c | M5M_RS16760 | P0A252 | - | 3762742 - 3763305 | 20884.5 |
| hydrogen peroxide-inducible genes activator | M5M_RS16765 | Q9X5P2 | + | 3763422 - 3764315 | 32934.2 |
| nadp-dependent malic enzyme | M5M_RS16770 | O30807 | + | 3764492 - 3766771 | 82031.1 |
| nuclear transport factor 2 family protein | M5M_RS16775 | Not Available | + | 3766835 - 3767266 | 15820.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.