Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygalactonokinase | M5M_RS16680 | Q92RN7 | + | 3740575 - 3741459 | 31470.8 |
| smp-30/gluconolactonase/lre family protein | M5M_RS16685 | Q1JUP5 | - | 3741486 - 3742382 | 33232.1 |
| tonb-dependent receptor | M5M_RS16690 | Not Available | + | 3742659 - 3745430 | 100798.0 |
| tryptophan halogenase family protein | M5M_RS16695 | Not Available | + | 3745531 - 3747084 | 57580.1 |
| sapc family protein | M5M_RS16700 | Not Available | + | 3747094 - 3747792 | 25518.7 |
| mfs transporter | M5M_RS16705 | P0AA77 | + | 3747789 - 3749027 | 44799.3 |
| smp-30/gluconolactonase/lre family protein | M5M_RS16710 | Q01578 | + | 3749048 - 3750022 | 35307.7 |
| agarase | M5M_RS16715 | Not Available | + | 3750048 - 3752351 | 85649.5 |
| catalase/peroxidase hpi | M5M_RS16720 | B3PEP6 | + | 3752528 - 3754732 | 79704.6 |
| nad(p)-binding protein | M5M_RS16725 | Not Available | - | 3754839 - 3756698 | 68527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.