Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | M5M_RS16630 | Q92RN8 | - | 3728470 - 3729108 | 22331.2 |
| sugar porter family mfs transporter | M5M_RS16635 | P96710 | + | 3729325 - 3730890 | 55956.2 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS16640 | A0QYC2 | + | 3730918 - 3731685 | 26202.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | M5M_RS16645 | Q6CYT9 | + | 3731707 - 3732861 | 42447.5 |
| hypothetical protein | M5M_RS16650 | P48840 | + | 3733014 - 3735299 | 84535.2 |
| mandelate racemase/muconate lactonizing enzyme family protein | M5M_RS16655 | H2IFX0 | + | 3735397 - 3736536 | 41621.6 |
| zinc-binding dehydrogenase | M5M_RS16660 | Q15SS1 | + | 3736554 - 3737579 | 36048.5 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS16665 | Q15SS0 | + | 3737607 - 3738371 | 26978.3 |
| aldehyde dehydrogenase | M5M_RS16670 | Not Available | + | 3738376 - 3739827 | 52056.4 |
| gntr family transcriptional regulator | M5M_RS16675 | Not Available | - | 3739882 - 3740487 | 22681.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.