Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | M5M_RS16530 | H2IFE7 | - | 3697382 - 3698824 | 51709.1 |
| enoyl-coa hydratase/isomerase family protein | M5M_RS16535 | A4YI89 | - | 3698837 - 3699628 | 27994.7 |
| caib/baif coa-transferase family protein | M5M_RS16540 | A9X6P9 | - | 3699625 - 3700785 | 42238.7 |
| caib/baif coa-transferase family protein | M5M_RS16545 | Q7CXU0 | - | 3700782 - 3701930 | 41541.1 |
| extracellular solute-binding protein | M5M_RS16550 | Not Available | - | 3701934 - 3703079 | 42464.2 |
| iclr family transcriptional regulator | M5M_RS16555 | Not Available | + | 3703205 - 3703957 | 26624.5 |
| carbohydrate-binding protein | M5M_RS16560 | Not Available | + | 3704276 - 3708295 | 145246.0 |
| nuclear transport factor 2 family protein | M5M_RS16565 | Not Available | + | 3708711 - 3709247 | 20095.1 |
| hypothetical protein | M5M_RS16570 | Not Available | + | 3709240 - 3709704 | 16662.6 |
| hypothetical protein | M5M_RS16575 | Not Available | + | 3709868 - 3710800 | 33270.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.