Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | M5M_RS16475 | Q5SWY8 | + | 3679955 - 3681811 | 68481.7 |
| glycosidase | M5M_RS16480 | Q5LH68 | + | 3681898 - 3683076 | 43708.6 |
| age family epimerase/isomerase | M5M_RS16485 | F8WRK9 | + | 3683089 - 3684297 | 46140.3 |
| cellulase family glycosylhydrolase | M5M_RS16490 | Not Available | + | 3684313 - 3685893 | 58734.3 |
| cellulase family glycosylhydrolase | M5M_RS16495 | Q10B67 | - | 3685911 - 3687137 | 45691.2 |
| glucose-6-phosphate isomerase | M5M_RS16500 | Q2S8W1 | - | 3687239 - 3688885 | 59991.6 |
| rok family protein | M5M_RS16505 | P43468 | - | 3688872 - 3689753 | 31386.7 |
| tonb-dependent receptor | M5M_RS16510 | Not Available | + | 3690092 - 3692998 | 104522.0 |
| cbm35 domain-containing protein | M5M_RS16520 | Q5W6G0 | + | 3693590 - 3696361 | 100041.0 |
| hypothetical protein | M5M_RS16525 | Not Available | + | 3696559 - 3697374 | 29901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.