Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| surface lipoprotein assembly modifier | M5M_RS16425 | Not Available | + | 3666887 - 3667867 | 36022.0 |
| s8 family serine peptidase | M5M_RS16430 | P00781 | - | 3667944 - 3669308 | 47707.1 |
| rna polymerase sigma factor | M5M_RS16435 | B3Q6P8 | + | 3669461 - 3669952 | 18019.0 |
| hypothetical protein | M5M_RS16440 | Not Available | + | 3669949 - 3670698 | 26855.3 |
| cc0125/cc1285 family lipoprotein | M5M_RS16445 | Not Available | + | 3670708 - 3671214 | 18302.7 |
| glutathione-dependent disulfide-bond oxidoreductase | M5M_RS16450 | Q46845 | - | 3671337 - 3672179 | 31687.8 |
| tonb-dependent receptor | M5M_RS16455 | Not Available | + | 3672674 - 3675832 | 115297.0 |
| phosphomannomutase/phosphoglucomutase | M5M_RS16460 | P0C7J2 | - | 3676065 - 3677417 | 50382.7 |
| age family epimerase/isomerase | M5M_RS16465 | Not Available | - | 3677414 - 3678592 | 44533.2 |
| laci family dna-binding transcriptional regulator | M5M_RS16470 | P0ACN9 | - | 3678719 - 3679711 | 36015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.