Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| age family epimerase/isomerase | M5M_RS16230 | F2JVT6 | + | 3605319 - 3606527 | 46036.5 |
| gh92 family glycosyl hydrolase | M5M_RS16235 | O86365 | + | 3606529 - 3608832 | 85596.5 |
| cytosine permease | M5M_RS16240 | Not Available | + | 3608834 - 3610252 | 51116.2 |
| hypothetical protein | M5M_RS20415 | Not Available | + | 3610252 - 3610428 | 6680.48 |
| glycoside hydrolase family 38 c-terminal domain-containing protein | M5M_RS16245 | Q9NTJ4 | + | 3610501 - 3613809 | 123920.0 |
| tonb-dependent receptor | M5M_RS16250 | Not Available | + | 3614117 - 3617194 | 112875.0 |
| hypothetical protein | M5M_RS16255 | Not Available | + | 3617270 - 3619837 | 94826.4 |
| sugar phosphate isomerase/epimerase | M5M_RS16260 | Not Available | + | 3619837 - 3620661 | 30861.5 |
| aldose epimerase family protein | M5M_RS16265 | Not Available | - | 3620618 - 3621583 | 36155.8 |
| fatty acid desaturase | M5M_RS16270 | A6T526 | + | 3621695 - 3623926 | 84282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.