Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | M5M_RS15980 | Q5SMG8 | - | 3546396 - 3547739 | 48524.7 |
| universal stress protein | M5M_RS15985 | Not Available | - | 3547746 - 3548654 | 32793.5 |
| na/pi cotransporter family protein | M5M_RS15990 | P54463 | - | 3548824 - 3550425 | 56509.6 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | M5M_RS15995 | Q5SLP1 | - | 3550426 - 3551829 | 51953.0 |
| s9 family peptidase | M5M_RS16000 | Not Available | - | 3551896 - 3553860 | 72937.9 |
| lysr family transcriptional regulator | M5M_RS16005 | P76250 | - | 3553991 - 3554884 | 32752.3 |
| doxx family protein | M5M_RS16010 | P42619 | + | 3555024 - 3555416 | 13454.8 |
| class iii extradiol ring-cleavage dioxygenase | M5M_RS16015 | A0A0F7CUE8 | + | 3555413 - 3556186 | 28493.9 |
| hypothetical protein | M5M_RS16020 | Not Available | - | 3556204 - 3556917 | 26234.2 |
| isoprenoid biosynthesis glyoxalase elbb | M5M_RS16025 | P0ABU5 | + | 3557241 - 3557891 | 22411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.