Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | M5M_RS15880 | Q4QNS6 | + | 3524318 - 3526339 | 73408.9 |
| heme utilization cystosolic carrier protein hutx | M5M_RS15885 | Not Available | + | 3526347 - 3526736 | 14050.8 |
| hugz family protein | M5M_RS15890 | Q9KL41 | + | 3526733 - 3527257 | 19094.8 |
| abc transporter substrate-binding protein | M5M_RS15895 | Not Available | - | 3527254 - 3528102 | 31428.4 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS15900 | Not Available | - | 3528194 - 3528898 | 25851.0 |
| thiol-disulfide oxidoreductase dcc family protein | M5M_RS15905 | Not Available | - | 3528911 - 3529330 | 16171.6 |
| duf3429 domain-containing protein | M5M_RS15910 | Not Available | - | 3529327 - 3529758 | 15586.6 |
| dash family cryptochrome | M5M_RS15915 | Q9KR33 | + | 3529845 - 3531146 | 49525.3 |
| cryptochrome/photolyase family protein | M5M_RS15920 | A9CH39 | + | 3531143 - 3532690 | 59238.0 |
| abc transporter substrate-binding protein | M5M_RS15925 | Not Available | - | 3532695 - 3533312 | 23074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.