Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation:dicarboxylate symporter family transporter | M5M_RS15175 | P24944 | + | 3356066 - 3358234 | 79463.8 |
| phosphoglycolate phosphatase | M5M_RS15180 | Q48NS2 | - | 3358711 - 3359385 | 23277.1 |
| ribulose-phosphate 3-epimerase | M5M_RS15185 | P44756 | - | 3359382 - 3360056 | 23967.1 |
| duf3530 family protein | M5M_RS15190 | Not Available | + | 3360156 - 3361223 | 38309.1 |
| hypothetical protein | M5M_RS15195 | Not Available | - | 3361279 - 3362016 | 26935.2 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | M5M_RS15200 | Q88QT2 | - | 3362055 - 3362750 | 26086.0 |
| aminoglycoside phosphotransferase family protein | M5M_RS15205 | Q88QT3 | - | 3362751 - 3363848 | 41522.8 |
| lps-assembly protein lptd | M5M_RS15210 | Q21MS7 | + | 3363930 - 3366479 | 96043.5 |
| peptidylprolyl isomerase | M5M_RS15215 | Q21MS8 | + | 3366490 - 3367779 | 47573.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | M5M_RS15220 | C4ZPX8 | + | 3367804 - 3368784 | 34597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.