Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | M5M_RS15125 | Not Available | + | 3345544 - 3346008 | 16947.4 |
| vanz family protein | M5M_RS15130 | Not Available | - | 3345983 - 3346369 | 14249.4 |
| mechanosensitive ion channel domain-containing protein | M5M_RS15135 | Not Available | - | 3346366 - 3348018 | 61138.3 |
| 2og-fe(ii) oxygenase | M5M_RS15140 | Not Available | - | 3348075 - 3348704 | 23541.7 |
| fatty acid cis/trans isomerase | M5M_RS15145 | Not Available | - | 3348811 - 3351189 | 90289.1 |
| duf2179 domain-containing protein | M5M_RS15150 | Q21N99 | - | 3351205 - 3351798 | 22026.1 |
| indole-3-glycerol phosphate synthase trpc | M5M_RS15155 | C1DHY7 | - | 3351815 - 3352612 | 29490.4 |
| anthranilate phosphoribosyltransferase | M5M_RS15160 | B3PLP1 | - | 3352643 - 3353680 | 35768.1 |
| aminodeoxychorismate/anthranilate synthase component ii | M5M_RS15165 | P00901 | - | 3353693 - 3354271 | 21244.4 |
| anthranilate synthase component i | M5M_RS15170 | P20580 | - | 3354288 - 3355757 | 53888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.