Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sufe family protein | M5M_RS14725 | A1JPC1 | + | 3259910 - 3260332 | 15666.8 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | M5M_RS14730 | Q46927 | - | 3260289 - 3261113 | 29421.6 |
| 5-guanidino-2-oxopentanoate decarboxylase | M5M_RS14735 | Q9HUI8 | - | 3261220 - 3262812 | 56367.3 |
| hypothetical protein | M5M_RS14740 | Not Available | - | 3262892 - 3263584 | 26342.3 |
| hypothetical protein | M5M_RS14745 | Not Available | - | 3263584 - 3264690 | 39710.4 |
| s8 family serine peptidase | M5M_RS14750 | P29141 | + | 3265192 - 3268128 | 102409.0 |
| tetratricopeptide repeat-containing diguanylate cyclase | M5M_RS14755 | P0AA90 | + | 3268390 - 3270249 | 69630.3 |
| glutathione peroxidase | M5M_RS14760 | O08368 | + | 3270307 - 3270849 | 19636.2 |
| murein l,d-transpeptidase | M5M_RS14765 | Not Available | + | 3270978 - 3272600 | 60921.0 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | M5M_RS14770 | Not Available | + | 3272597 - 3273517 | 33520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.