Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | M5M_RS14625 | Not Available | + | 3234659 - 3235240 | 21106.2 |
| helix-turn-helix domain-containing protein | M5M_RS14630 | Not Available | - | 3235241 - 3236386 | 42817.5 |
| cellulase family glycosylhydrolase | M5M_RS14635 | P10474 | + | 3236800 - 3238497 | 61826.7 |
| glycoside hydrolase family 9 protein | M5M_RS14640 | P26225 | + | 3238575 - 3241661 | 108590.0 |
| lytic polysaccharide monooxygenase | M5M_RS14645 | P18126 | + | 3241743 - 3243275 | 53199.1 |
| sigma-54 dependent transcriptional regulator | M5M_RS14650 | Q8Z333 | + | 3243917 - 3244906 | 36076.0 |
| hypothetical protein | M5M_RS14655 | Not Available | - | 3244992 - 3246653 | 62937.0 |
| hypothetical protein | M5M_RS14660 | Not Available | - | 3246650 - 3247981 | 49433.9 |
| hypothetical protein | M5M_RS14665 | Not Available | - | 3247984 - 3248553 | 20667.3 |
| hypothetical protein | M5M_RS14670 | Not Available | - | 3248540 - 3248965 | 15439.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.