Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | M5M_RS01410 | Not Available | - | 304723 - 305445 | 26466.5 |
| Trna-arg | Not Available | Not Available | + | 305548 - 305624 | Not Available |
| arsenosugar biosynthesis radical sam (seleno)protein arss | M5M_RS01420 | Not Available | + | 305676 - 306650 | 36147.6 |
| tigr04283 family arsenosugar biosynthesis glycosyltransferase | M5M_RS01425 | Not Available | + | 306643 - 307341 | 26057.7 |
| tigr04282 family arsenosugar biosynthesis glycosyltransferase | M5M_RS01430 | Not Available | + | 307334 - 307969 | 23100.7 |
| flavodoxin family protein | M5M_RS01435 | Not Available | - | 308303 - 308791 | 17386.9 |
| dna internalization-related competence protein comec/rec2 | M5M_RS01440 | P37443 | + | 308870 - 311188 | 85150.1 |
| mota/tolq/exbb proton channel family protein | M5M_RS01445 | Q55834 | + | 311256 - 311882 | 22185.5 |
| biopolymer transporter exbd | M5M_RS01450 | Not Available | + | 311884 - 312321 | 15577.6 |
| tetraacyldisaccharide 4'-kinase | M5M_RS01455 | A5W728 | + | 312325 - 313335 | 36971.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.