Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | M5M_RS14175 | O34451 | + | 3136635 - 3137612 | 33865.9 |
| abc transporter atp-binding protein | M5M_RS14180 | Q93SS1 | + | 3137628 - 3138401 | 27343.2 |
| nudix hydrolase | M5M_RS14185 | Not Available | + | 3138469 - 3139206 | 26503.4 |
| outer membrane beta-barrel protein | M5M_RS14190 | Not Available | - | 3139481 - 3139993 | 17933.5 |
| hypothetical protein | M5M_RS14195 | Not Available | - | 3140218 - 3140610 | 14781.6 |
| apc family permease | M5M_RS14200 | O07576 | - | 3140789 - 3142216 | 51086.6 |
| hypothetical protein | M5M_RS14205 | Not Available | - | 3142223 - 3142774 | 20363.2 |
| hypothetical protein | M5M_RS14210 | Not Available | - | 3142823 - 3143098 | 9913.88 |
| arac family transcriptional regulator | M5M_RS14215 | Not Available | - | 3143288 - 3144322 | 37979.3 |
| fatty acid desaturase | M5M_RS14220 | Not Available | + | 3144459 - 3145328 | 33183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.